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MLE of the local FDR
13 February 2013
DRB
Y. Yang, F. A. Aghababazadeh, and D. R. Bickel, “Parametric estimation of the local false discovery rate for identifying genetic associations,” IEEE/ACM Transactions on Computational Biology and Bioinformatics 10, 98-108 (2013). 2010 version | Slides
This article adapts two evidential, information-theoretic methods to the problem of detecting SNPs associated with disease on the basis of genome-wide association data. Both an application to coronary artery disease and an extensive set of simulation studies indicate that these parametric methods are viable competitors of a popular semi-parametric approach to estimating local false discovery rates.
Categories: complexity, empirical Bayes, genetic association, MDL, publications, slides, statistical evidence, trainee author
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